Hyun Seo Lee

Biomedical Engineering PhD student, Johns Hopkins University.

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Hi, welcome! I’m Hyun Seo (Emily), a first-year PhD student in Biomedical Engineering at Johns Hopkins University, advised by Nicholas Durr in the Computational Biophotonics Lab. I work at the intersection of machine learning and medical imaging, with a focus on building diagnostic and sensing systems that are efficient on edge devices, robust across patient populations and imaging conditions, and aware of their own uncertainty.

My current work spans two threads. The first is computational optical imaging: I’m developing a smartphone-based nailfold capillaroscopy system for non-invasive hemoglobin estimation, where sources of variability — skin tone, finger curvature, illumination — are treated as first-class design constraints rather than nuisances to correct for downstream. The second is adaptive inference for medical vision: I co-led a framework for medical Vision Transformers that combines token reduction with early exiting, allocating compute based on per-image difficulty while preserving diagnostic accuracy.

Outside of research, I enjoy playing volleyball and soccer, bingeing Netflix shows, and cooking Korean food. Always happy to chat about computational imaging, robust medical AI, or how research ideas become devices that reach patients — feel free to reach out.

My interests: Medical Imaging, Computational Optical Imaging, Nailfold Capillaroscopy, Vision Transformers, Smartphone Diagnostics, Robust Medical AI.

news

Mar 01, 2026 FlowInpaint, our work on robust hemoglobin measurement via microscopic flow-efficient video inpainting, has been submitted to MICCAI 2026 (co-first author). :microscope:
Aug 25, 2025 Started my Ph.D. in Biomedical Engineering at Johns Hopkins University, joining the Computational Biophotonics Lab with Prof. Nicholas Durr.
Jul 09, 2025 Our paper Adaptive Inference for Medical Vision Transformers was accepted to MIDL 2025 (co-first author).
May 22, 2025 Graduated from Johns Hopkins with a B.S. in Biomedical Engineering & Computer Science, and received the KASF Scholarship Award.

latest posts

selected publications

  1. MICCAI
    FlowInpaint: Robust Hemoglobin Measurement via Microscopic Flow-Efficient Video Inpainting
    L. Huang, M. Morakis, Hyun Seo Lee, and 6 more authors
    In Submitted to Medical Image Computing and Computer Assisted Intervention (MICCAI), 2026
    Submitted, MICCAI 2026. *Equal contribution.
  2. MIDL
    Adaptive Inference for Medical Vision Transformers: Token Reduction or Early Exit?
    Ji Young Byun, Hyun Seo Lee, Jordan M Shuff, and 3 more authors
    In Medical Imaging with Deep Learning (MIDL), 2026
    *Equal contribution.